BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D07SP1|AL429566
(804 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig284 1591 0.0
>3x_Contig284
Length = 1982
Score = 1591 bits (802), Expect = 0.0
Identities = 803/804 (99%)
Strand = Plus / Plus
Query: 1 gatcaccggtaccgttttaagaattatagttggtattctagcagtgttgacatggaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 gatcaccggtaccgttttaagaattatagttggtattctagcagtgttgacatggaaaac 1038
Query: 61 gttgagtaaaaaggtgatatactggtttttgtcaaagacgataggagatgatcgtccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 gttgagtaaaaaggtgatatactggtttttgtcaaagacgataggagatgatcgtccatt 1098
Query: 121 cacgaaggaggagctaaagcaacatcaggaaagtgcagaagtgagactatttacgccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 cacgaaggaggagctaaagcaacatcaggaaagtgcagaagtgagactatttacgccatt 1158
Query: 181 ggccaatattgatgttattggaagatccataatctatgcaggaattccagccaccgtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 ggccaatattgatgttattggaagatccataatctatgcaggaattccagccaccgtgat 1218
Query: 241 attgatatgtcctctactgtacaagctactggatatctacgaataagttaaaacaatatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 attgatatgtcctctactgtacaagctactggatatctacgaataagttaaaacaatatt 1278
Query: 301 aacaagttttgtgtatcaaaggagtgatttatagtatatgtttataaagagctctttact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 aacaagttttgtgtatcaaaggagtgatttatagtatatgtttataaagagctctttact 1338
Query: 361 atatctaggatatcattataaaaggcgaattaatgaaggggctgatagatggagacgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 atatctaggatatcattataaaaggcgaattaatgaaggggctgatagatggagacgaaa 1398
Query: 421 ttgaaacgatgcacacctgcatgcmactgagttggaaaacctccgcctaaatctgaaaaa 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1399 ttgaaacgatgcacacctgcatgcaactgagttggaaaacctccgcctaaatctgaaaaa 1458
Query: 481 gtaaaccagtgacttacccataagtcataattatttgatctgaaatccagttcagatcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1459 gtaaaccagtgacttacccataagtcataattatttgatctgaaatccagttcagatcaa 1518
Query: 541 ccgagtgtatatacagctagtagataaaatggtacgaggtctggatcagacgactgacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 ccgagtgtatatacagctagtagataaaatggtacgaggtctggatcagacgactgacat 1578
Query: 601 ctataactgaggagccccatttggataagccaattgtctcttaatggctaactttgcgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 ctataactgaggagccccatttggataagccaattgtctcttaatggctaactttgcgct 1638
Query: 661 caaaggaccgtatttggttgctacttctctgtattctttgaacgatttaaacgagttacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 caaaggaccgtatttggttgctacttctctgtattctttgaacgatttaaacgagttacc 1698
Query: 721 agcgttaaacaaagccgtattggccttggttgtggctactttgcttggaatagacacaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1699 agcgttaaacaaagccgtattggccttggttgtggctactttgcttggaatagacacaga 1758
Query: 781 agcgatggtagctacagaaggaat 804
||||||||||||||||||||||||
Sbjct: 1759 agcgatggtagctacagaaggaat 1782
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5079
Number of Sequences: 1807
Number of extensions: 5079
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 804
length of database: 10,358,551
effective HSP length: 16
effective length of query: 788
effective length of database: 10,329,639
effective search space: 8139755532
effective search space used: 8139755532
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)